论文标题
ISIA的基于结构的哈密顿模型发现了高度稳健的色素复合物
Structure-based Hamiltonian model for IsiA uncovers a highly robust pigment protein complex
论文作者
论文摘要
铁应激诱导的蛋白A(ISIA)是生物学研究中的兴趣和争论的根源。 ISIA超复合物,结合了200多个叶绿素,在光系统I(PSI)周围组装的多聚环。最近,ISIA-PSI结构已分辨为3.48Å。基于此结构,我们创建了一个模型,模拟了ISIA单体中的单个激发事件。该模型使我们能够计算ISIA结构中激发的荧光和定位。为了进一步检查该系统,将噪声以两种形式引入模型 - 热和位置。引入噪声突出了低温温度与生物学相关温度之间系统的功能差异。我们的结果表明,在室温下,ISIA色素 - 蛋白质复合物的能量非常强大。然而,特定叶绿素位置的转移会导致其光学和荧光性能发生很大变化。基于这些结果,我们讨论了高度健壮的结构的含义,并有可能以上下文的方式发挥不同的作用,这是我们对光合过程功能和演变的理解。
The iron stress-induced protein A (IsiA) is a source of interest and debate in biological research. The IsiA super-complex, binding over 200 chlorophylls, assembles in multimeric rings around photosystem I (PSI). Recently, the IsiA-PSI structure was resolved to 3.48 Å. Based on this structure, we created a model simulating a single excitation event in an IsiA monomer. This model enabled us to calculate the fluorescence and the localisation of the excitation in the IsiA structure. To further examine this system, noise was introduced to the model in two forms -- thermal and positional. Introducing noise highlights the functional differences in the system between cryogenic temperatures and biologically relevant temperatures. Our results show that the energetics of the IsiA pigment-protein complex are very robust at room temperature. Nevertheless, shifts in the position of specific chlorophylls lead to large changes in their optical and fluorescence properties. Based on these results we discuss the implication of highly robust structures, with potential for serving different roles in a context dependent manner, on our understanding of the function and evolution of photosynthetic processes.