论文标题
带有多个储层的粗粒熵产生:揭示时间尺度的作用和生物学启发系统中的详细平衡
Coarse-grained entropy production with multiple reservoirs: unraveling the role of time-scales and detailed balance in biology-inspired systems
论文作者
论文摘要
描述绝大多数生物学启发系统的一般框架是将它们建模为同时发挥多个耦合的随机过程。分子电动机,化学反应网络,催化酶和与不同浴缸交换热量的颗粒,构成了这种建模的一些有趣的例子。此外,它们通常以平衡作用,其特征是熵的净产生,这需要受到限制的效率。迄今为止,为了研究多个过程同时推动系统,所有理论方法都以粗粒级别独立处理它们,或采用时间表的分离。在这里,我们明确考虑了不同过程的时间尺度之间的相互作用,以及它们自己的演变是否最终在给定的子空间中朝着平衡状态放松。我们提出了一个用于多个耦合的一般框架,可以从该框架中得出熵生产的众所周知的公式,具体取决于每个过程的可用信息。此外,当其中一个过程在其子空间中没有平衡时,即使比所有其他过程都要快得多,它也会引入有限的校正熵生产。我们在各种简单和教学的示例中采用了我们的框架,这样的纠正术语可能与典型的游戏中的物理量缩放有关。
A general framework to describe a vast majority of biology-inspired systems is to model them as stochastic processes in which multiple couplings are in play at the same time. Molecular motors, chemical reaction networks, catalytic enzymes, and particles exchanging heat with different baths, constitute some interesting examples of such a modelization. Moreover, they usually operate out of equilibrium, being characterized by a net production of entropy, which entails a constrained efficiency. Hitherto, in order to investigate multiple processes simultaneously driving a system, all theoretical approaches deal with them independently, at a coarse-grained level, or employing a separation of time-scales. Here, we explicitly take in consideration the interplay among time-scales of different processes, and whether or not their own evolution eventually relaxes toward an equilibrium state in a given sub-space. We propose a general framework for multiple coupling, from which the well-known formulas for the entropy production can be derived, depending on the available information about each single process. Furthermore, when one of the processes does not equilibrate in its sub-space, even if much faster than all the others, it introduces a finite correction to the entropy production. We employ our framework in various simple and pedagogical examples, for which such a corrective term can be related to a typical scaling of physical quantities in play.