论文标题
多边形镶嵌作为分子单层的预测模型
Polygonal tessellations as predictive models of molecular monolayers
论文作者
论文摘要
分子自组装在技术和生物系统的各个方面都起着非常重要的作用。受共价,氢或范德华相互作用的控制 - 即使在两个维度(2D)中,相似分子的自组装也会产生各种各样的复杂模式。 2D分子网络的模式形成的预测非常重要,尽管非常具有挑战性,并且迄今为止依赖于计算涉及的方法,例如密度功能理论,经典分子动力学,蒙特卡洛或机器学习。但是,这种方法不能保证将考虑所有可能的模式,并且通常依赖直觉。在这里,我们介绍了一个基于2D多边形镶嵌的平均场理论,基于分子级信息的扩展网络模式,介绍了一个更简单,虽然严格,层次的几何模型。基于图理论,该方法在明确定义的范围内产生模式分类和模式预测。当应用于现有的实验数据时,我们的模型提供了自组装分子模式的全新观点,从而对可接受的模式和潜在的其他阶段进行了有趣的预测。虽然为氢键系统开发,但可能会出现共价键合石墨烯衍生的材料或诸如富勒烯等3D结构的扩展,这大大开放了潜在的未来应用范围。
Molecular self-assembly plays a very important role in various aspects of technology as well as in biological systems. Governed by the covalent, hydrogen or van der Waals interactions - self-assembly of alike molecules results in a large variety of complex patterns even in two dimensions (2D). Prediction of pattern formation for 2D molecular networks is extremely important, though very challenging, and so far, relied on computationally involved approaches such as density functional theory, classical molecular dynamics, Monte Carlo, or machine learning. Such methods, however, do not guarantee that all possible patterns will be considered and often rely on intuition. Here we introduce a much simpler, though rigorous, hierarchical geometric model founded on the mean-field theory of 2D polygonal tessellations to predict extended network patterns based on molecular-level information. Based on graph theory, this approach yields pattern classification and pattern prediction within well-defined ranges. When applied to existing experimental data, our model provides an entirely new view of self-assembled molecular patterns, leading to interesting predictions on admissible patterns and potential additional phases. While developed for hydrogen-bonded systems, an extension to covalently bonded graphene-derived materials or 3D structures such as fullerenes is possible, significantly opening the range of potential future applications.