论文标题

CirclesNake:带有圆表示的实例分割

CircleSnake: Instance Segmentation with Circle Representation

论文作者

Nguyen, Ethan H., Yang, Haichun, Asad, Zuhayr, Deng, Ruining, Fogo, Agnes B., Huo, Yuankai

论文摘要

最近已将圆形表示作为医学成像优化表示形式,以在球形医学对象上进行更有效的实例对象检测。凭借其卓越的实例检测性能,它很吸引人将圆表示为实例医学对象细分。在这项工作中,我们提出了圆圈,这是一种简单的端到端圆圈轮廓变形的分割方法,用于球形医学对象。与普遍的深nake方法相比,我们的贡献是三倍:(1)我们将复杂的边界框用无计算和一致的边界圆将复杂的边界框替换为圆形轮廓圆,以使圆形轮廓适应性用于分割球形的医疗对象; (2)与八角形表示相比(DOF = 8)相比,圆表示的自由度较少(DOF = 2),从而产生更强大的分割性能和更好的旋转一致性; (3)据我们所知,提出的圆圈方法是第一个端到端圆表示深度分割管道方法,具有一致的圆检测,圆形轮廓建议和圆形卷积。关键创新是将圆形卷积与圆检测集成到端到端实例分割框架中,该框架由提出的简单且一致的圆形轮廓表示启用。肾小球用于评估基准的性能。从结果来看,圆圈将肾小球检测的平均精度从0.559提高到0.614。骰子得分从0.804增加到0.849。该代码已发布:https://github.com/hrlblab/circlesnake

Circle representation has recently been introduced as a medical imaging optimized representation for more effective instance object detection on ball-shaped medical objects. With its superior performance on instance detection, it is appealing to extend the circle representation to instance medical object segmentation. In this work, we propose CircleSnake, a simple end-to-end circle contour deformation-based segmentation method for ball-shaped medical objects. Compared to the prevalent DeepSnake method, our contribution is three-fold: (1) We replace the complicated bounding box to octagon contour transformation with a computation-free and consistent bounding circle to circle contour adaption for segmenting ball-shaped medical objects; (2) Circle representation has fewer degrees of freedom (DoF=2) as compared with the octagon representation (DoF=8), thus yielding a more robust segmentation performance and better rotation consistency; (3) To the best of our knowledge, the proposed CircleSnake method is the first end-to-end circle representation deep segmentation pipeline method with consistent circle detection, circle contour proposal, and circular convolution. The key innovation is to integrate the circular graph convolution with circle detection into an end-to-end instance segmentation framework, enabled by the proposed simple and consistent circle contour representation. Glomeruli are used to evaluate the performance of the benchmarks. From the results, CircleSnake increases the average precision of glomerular detection from 0.559 to 0.614. The Dice score increased from 0.804 to 0.849. The code has been released: https://github.com/hrlblab/CircleSnake

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